CDS

Accession Number TCMCG017C20852
gbkey CDS
Protein Id OMO82307.1
Location join(97017..97184,97276..97458,97551..97681,98085..98253,98461..98590,98731..98990)
GeneID InterPro:IPR005024
Organism Corchorus olitorius
locus_tag COLO4_23116

Protein

Length 346aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018155.1
Definition Snf7 [Corchorus olitorius]
Locus_tag COLO4_23116

EGGNOG-MAPPER Annotation

COG_category U
Description Belongs to the SNF7 family
KEGG_TC -
KEGG_Module M00412        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K15053        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
ko04217        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
map04217        [VIEW IN KEGG]
GOs GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000815        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006998        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0010458        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031468        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0036452        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044770        [VIEW IN EMBL-EBI]
GO:0044772        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045324        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0140014        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGTATAATGAAGGTGAAATAACTCGAATTTCGGACGTGGCGGATCCTTATAGCGGGAAAATATCTCAGTTATTTAGGAAAGTTAAAGGTTTGATGAACAGATCAGCATTGACTCCAGAAGAAATTCTTGGTGAAGATCGCGTCATTCTCACAACTTTATTAAAGGAGAAAGCTGATGAGGTAGTTAAGTGTTTGTGTGAAAGTCATTGGATGTCGTCTTGCATTGTTACGAGGAATAAGTTTGAGAGCATGTGTGGAGGACATGAGGAAGCATATGCAGTATTGAGTTATCTGTCGAGGTATGGAAAAGGACTGTATCTCTCGACAAAGAAGAAAGAGTTTATTGAGGGCATAAAGGTTTCCCTTTCATCAGCAGGGGTTTCCAATGTCTCAAGCTTAGATTTTGATACTCTCCACCTGATTTGGACTCAAGAAATACTCCAGCAACAACTTGATGTGATTGACCGACGCTGGGAAAAGTCAAGACAGTCAGCATTGGCTTCTTTGAAGTCTGGGAACAAGAAATTGGCCCTGAGATATGCAAGGGAGATGAAGTTGGGCACTGGGAATAGAGAAAAATGTACCTCACTTCTGAATAGGGTGGAGGAAGTCTTAAGTGTGATTGCAAATGCTGAATCAACAAAGAAGGTAACTGAAGCAATCCAGATTGGAGCACGAGCAATAAAGGAAAATAAGATCAGTGTGGAAGAAGTTCAACTCTGCTTGGAAGAACTTGATGAGAGCATTGATTCACAGAAGCAAGTTGAAATGGCTCTAGAATCGGCTCCATCCCTGGGCATTGAGGATGAAGATATTGAAGAGGAATTCAAGAAATTAGAGTTGGAAGTTGGAGAAAACCTCAAAGATTCAACCCCTGAAACTGGTGTCAGTGATACAGCAGGACTTAATGAATCATTGACTGAAGCTTTGTCGAATTTAAAACTAGCAGATGCTCCAGCCAAGGGATCAGCAACTGAGAGTTCTGGGGTACCAGCTAAGAACAAGGAATCAAATAGTCCGATGCTTGAAGCTGCATAA
Protein:  
MMYNEGEITRISDVADPYSGKISQLFRKVKGLMNRSALTPEEILGEDRVILTTLLKEKADEVVKCLCESHWMSSCIVTRNKFESMCGGHEEAYAVLSYLSRYGKGLYLSTKKKEFIEGIKVSLSSAGVSNVSSLDFDTLHLIWTQEILQQQLDVIDRRWEKSRQSALASLKSGNKKLALRYAREMKLGTGNREKCTSLLNRVEEVLSVIANAESTKKVTEAIQIGARAIKENKISVEEVQLCLEELDESIDSQKQVEMALESAPSLGIEDEDIEEEFKKLELEVGENLKDSTPETGVSDTAGLNESLTEALSNLKLADAPAKGSATESSGVPAKNKESNSPMLEAA